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egf_cache is removed. Serializing objects under
tools::R_user_dir("epigrowthfit", "cache") for reuse in
examples and tests introduced a race condition when running two
or more checks concurrently, and workarounds were not appealing.
emdbook is removed from the Suggests field of
‘DESCRIPTION’. A full check of the package requires only
TMB and its dependencies.
Use \donttest for examples in
‘man/profile.egf.Rd’, which remained too long.
Include URL in ‘man/covid19.ontario.Rd’ with
\verb instead of \href to avoid HTTP 403.
Expand ‘Description’ field in ‘DESCRIPTION’.
Add \value tags to two ‘man/*.Rd’.
Clean up after par calls in plot method.
Do not assign to global environment in simulate
methods.
A “traditional” model estimating function egf,
returning model objects of class egf.
Methods for generic functions: coef, confint,
df.residual, extractAIC, fitted,
fixef (from nlme), formula, getCall,
logLik, model.frame, model.matrix,
nobs, plot, predict, print,
profile, ranef (from nlme), simulate,
summary, terms, vcov.
Auxiliary functions of use in epidemiology:
R0, finalsize, timescale, [dpqr]gi.
For as long as the version number is 0.y.z, details of the API are subject to change without formal deprecation. Significant user-visible changes will be documented here.