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Function egf1 wrapping function egf and
handling its simplest usage, when there is exactly one time series
and exactly one fitting window.
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Tests in ‘tests/egf_utils.R’ wrongly relied on the
type of the value of a call to seq.int, causing errors
under R 4.5.
emdbook is removed from Suggests. A full check
of the package requires only TMB and its dependencies.
egf_cache is removed. Serializing objects under
tools::R_user_dir("epigrowthfit", "cache") for reuse in
examples and tests introduced a race condition when running two
or more checks concurrently, and workarounds were not appealing.
\donttest is used for examples in
‘man/profile.egf.Rd’, which remained too long.
\verb is used instead of \href for URL in
‘man/covid19.ontario.Rd’ to avoid HTTP 403.
‘Description’ field is expanded.
\value tags are added to two ‘man/*.Rd’.
Methods for plot clean up after calls to par.
Methods for simulate no longer assign to the global
environment.
For as long as the version number is 0.y.z, details of the API are subject to change without formal deprecation. Significant user-visible changes will be documented here.
A “traditional” model estimating function egf,
returning model objects of class egf.
Methods for generic functions: coef, confint,
df.residual, extractAIC, fitted,
fixef (from nlme), formula, getCall,
logLik, model.frame, model.matrix,
nobs, plot, predict, print,
profile, ranef (from nlme), simulate,
summary, terms, vcov.
Auxiliary functions of use in epidemiology:
R0, finalsize, timescale, [dpqr]gi.